This browser-based software supports secondary analysis through a graphical or command-line user interface. Extensive APIs enable easy integration of this platform with your current analytical workflow. SMRT Analysis software includes a comprehensive set of applications for genomic analysis, including de novo assembly, variant calling, transcriptome analysis, epigenomics, and more. These applications support your research efforts by offering an array of analysis options to provide the insight and flexibility you need.
This open-source, browser-based application allows you to create, submit, and monitor secondary analysis jobs and view/download analysis results. You can also manage secondary analysis protocols and reference sequences. SMRT Portal produces experiment-specific, data-rich reports in industry-standard output formats. All data files are accessible directly through SMRT Portal, allowing for easy third-party software analysis and collaboration.
SMRT Analysis APIs
SMRT Analysis software offers extensive integration capabilities through a comprehensive suite of REST-based Secondary Analysis Web Service APIs. The APIs can be used to integrate SMRT Analysis with your LIMS, internal and third-party applications, or data-mining pipeline.
SMRT View is a scalable genome browser that allows you to visualize and interact with secondary analysis sequencing data. It is also the first data-visualization application that can show kinetics and structure information unique to PacBio's SMRT technology.
The SMRT Analysis software includes a comprehensive set of applications for genomic analysis, including de novo assembly, variant calling, transcriptome analysis, and epigenomics.